Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i 3-dehydroquinate dehydratase | E0F20_12115 | Not Available | Negative | 2467832 - 2468590 | 27582.7 |
| ai-2e family transporter ydik | E0F20_12125 | Not Available | Negative | 2469050 - 2470159 | 39714.5 |
| hypothetical protein | E0F20_12130 | Not Available | Negative | 2470153 - 2470368 | 8104.06 |
| fad-binding oxidoreductase | E0F20_12135 | Not Available | Positive | 2470373 - 2473429 | 113350.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | E0F20_12140 | Not Available | Positive | 2473426 - 2473836 | 14917.1 |
| hypothetical protein | E0F20_12145 | Not Available | Positive | 2473914 - 2474102 | 7299.9 |
| mbl fold metallo-hydrolase | E0F20_12150 | Not Available | Negative | 2474169 - 2475020 | 30901.8 |
| lysr family transcriptional regulator | E0F20_12155 | Not Available | Positive | 2475143 - 2476021 | 31332.0 |
| hypothetical protein | E0F20_12160 | Not Available | Positive | 2476409 - 2477081 | 25703.1 |
| type 1 fimbrial protein | E0F20_12165 | Not Available | Positive | 2477325 - 2477879 | 18752.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

