Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydiu family protein | E0F20_12065 | Not Available | Positive | 2455495 - 2456937 | 54704.4 |
| heme abc transporter atp-binding protein | E0F20_12070 | Not Available | Negative | 2456934 - 2457713 | 28585.7 |
| iron abc transporter permease | E0F20_12075 | Not Available | Negative | 2457706 - 2458698 | 34958.4 |
| hemin abc transporter substrate-binding protein | E0F20_12080 | Not Available | Negative | 2458698 - 2459519 | 28885.0 |
| heme oxygenase chus | E0F20_12085 | Not Available | Negative | 2459516 - 2460547 | 38414.6 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | E0F20_12090 | Not Available | Negative | 2460595 - 2462577 | 72113.5 |
| hemin uptake protein hemp | E0F20_12095 | Not Available | Negative | 2462652 - 2462840 | 6921.26 |
| 3-deoxy-7-phosphoheptulonate synthase aroh | E0F20_12100 | Not Available | Negative | 2463010 - 2464056 | 38669.2 |
| kinase/pyrophosphorylase | E0F20_12105 | Not Available | Negative | 2464183 - 2465016 | 31198.7 |
| phosphoenolpyruvate synthase | E0F20_12110 | Not Available | Positive | 2465344 - 2467722 | 87224.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

