Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | E0F20_12010 | Not Available | Positive | 2446697 - 2446894 | 7221.25 |
| 50s ribosomal protein l20 | E0F20_12015 | Not Available | Positive | 2446950 - 2447306 | 13455.7 |
| phenylalanine--trna ligase subunit alpha | E0F20_12025 | Not Available | Positive | 2447676 - 2448659 | 36961.0 |
| phenylalanine--trna ligase subunit beta | E0F20_12030 | Not Available | Positive | 2448675 - 2451062 | 87142.8 |
| integration host factor subunit alpha | E0F20_12035 | Not Available | Positive | 2451067 - 2451366 | 11382.6 |
| vitamin b12 abc transporter permease btuc | E0F20_12040 | Not Available | Positive | 2451520 - 2452500 | 34934.3 |
| glutathione peroxidase | E0F20_12045 | Not Available | Positive | 2452561 - 2453112 | 20393.2 |
| vitamin b12 abc transporter atp-binding protein btud | E0F20_12050 | Not Available | Positive | 2453112 - 2453861 | 27128.0 |
| endopeptidase | E0F20_12055 | Not Available | Positive | 2453939 - 2454403 | 17332.7 |
| eal domain-containing protein | E0F20_12060 | Not Available | Positive | 2454720 - 2455433 | 26490.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

