Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | E0F20_11960 | Not Available | Negative | 2438052 - 2439065 | 36450.2 |
| 4-phosphoerythronate dehydrogenase pdxb | E0F20_11965 | Not Available | Negative | 2439134 - 2440270 | 41001.4 |
| flagella biosynthesis regulator flk | E0F20_11970 | Not Available | Positive | 2440379 - 2441380 | 36987.7 |
| mfs transporter | E0F20_11975 | Not Available | Negative | 2441377 - 2442555 | 40592.7 |
| hypothetical protein | E0F20_11980 | Not Available | Negative | 2442735 - 2443109 | 14389.3 |
| transcriptional regulator | E0F20_11985 | Not Available | Positive | 2443281 - 2443533 | 9738.53 |
| gtra family protein | E0F20_11990 | Not Available | Negative | 2443534 - 2443730 | 7359.02 |
| hypothetical protein | E0F20_11995 | Not Available | Positive | 2443778 - 2444038 | 9584.64 |
| threonine--trna ligase | E0F20_12000 | Not Available | Positive | 2444126 - 2446054 | 74059.5 |
| translation initiation factor if-3 | E0F20_12005 | Not Available | Positive | 2446058 - 2446600 | 20438.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

