Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muropeptide mfs transporter ampg | E0F20_11810 | Not Available | Positive | 2408296 - 2409771 | 53656.0 |
| pyridoxal phosphate-dependent aminotransferase | E0F20_11815 | Not Available | Positive | 2410251 - 2411468 | 45598.1 |
| 5'-deoxynucleotidase | E0F20_11820 | Not Available | Positive | 2411552 - 2412151 | 22763.4 |
| slc13 family permease | E0F20_11825 | Not Available | Negative | 2412253 - 2414085 | 65708.9 |
| sugar phosphatase | E0F20_11830 | Not Available | Negative | 2414163 - 2414840 | 23875.6 |
| yfbu family protein | E0F20_11835 | Not Available | Negative | 2414833 - 2415327 | 19481.3 |
| duf412 domain-containing protein | E0F20_11840 | Not Available | Negative | 2415411 - 2415866 | 17250.2 |
| acetate kinase | E0F20_11845 | Not Available | Positive | 2416206 - 2417408 | 43093.7 |
| phosphate acetyltransferase | E0F20_11850 | Not Available | Positive | 2417485 - 2419629 | 77246.7 |
| putative basic amino acid antiporter yfcc | E0F20_11855 | Not Available | Positive | 2419828 - 2421348 | 54803.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

