Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_11760 | Not Available | Negative | 2397453 - 2397827 | 12846.5 |
| peptidylprolyl isomerase | E0F20_11765 | Not Available | Negative | 2397974 - 2399848 | 67919.2 |
| dna-binding protein hu-beta | E0F20_11770 | Not Available | Negative | 2400116 - 2400388 | 9196.06 |
| endopeptidase la | E0F20_11775 | Not Available | Negative | 2400597 - 2402951 | 87367.2 |
| atp-dependent protease atp-binding subunit clpx | E0F20_11780 | Not Available | Negative | 2403136 - 2404410 | 46264.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | E0F20_11785 | Not Available | Negative | 2404537 - 2405160 | 23202.0 |
| trigger factor | E0F20_11790 | Not Available | Negative | 2405408 - 2406706 | 47993.1 |
| hypothetical protein | E0F20_11795 | Not Available | Positive | 2406899 - 2407123 | 8660.65 |
| transcriptional regulator bola | E0F20_11800 | Not Available | Negative | 2407050 - 2407367 | 11967.3 |
| hypothetical protein | E0F20_11805 | Not Available | Positive | 2407673 - 2408251 | 20811.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

