Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_11505 | Not Available | Negative | 2353127 - 2353225 | 3474.45 |
| sensor domain-containing diguanylate cyclase | E0F20_11510 | Not Available | Negative | 2353273 - 2354298 | 38583.2 |
| duf333 domain-containing protein | E0F20_11515 | Not Available | Positive | 2354485 - 2354733 | 8680.63 |
| duf488 domain-containing protein | E0F20_11520 | Not Available | Negative | 2354741 - 2355088 | 13477.0 |
| hypothetical protein | E0F20_11525 | Not Available | Positive | 2355266 - 2355973 | 25640.4 |
| mfs transporter | E0F20_11530 | Not Available | Negative | 2356010 - 2357197 | 40996.5 |
| arac family transcriptional regulator | E0F20_11535 | Not Available | Positive | 2357297 - 2358115 | 30577.3 |
| duf441 domain-containing protein | E0F20_11540 | Not Available | Negative | 2358072 - 2358518 | 15289.6 |
| ybak/prolyl-trna synthetase associated domain-containing protein | E0F20_11545 | Not Available | Negative | 2358657 - 2359160 | 17957.7 |
| diguanylate cyclase | E0F20_11550 | Not Available | Negative | 2359204 - 2360694 | 56839.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

