Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamidase/pyrazinamidase | E0F20_11255 | Not Available | Positive | 2301778 - 2302422 | 23315.5 |
| mfs transporter | E0F20_11260 | Not Available | Negative | 2302460 - 2303818 | 50066.9 |
| deor/glpr transcriptional regulator | E0F20_11265 | Not Available | Negative | 2303959 - 2304717 | 28343.1 |
| aldo/keto reductase | E0F20_11270 | Not Available | Negative | 2304854 - 2305837 | 36255.0 |
| sugar kinase | E0F20_11275 | Not Available | Negative | 2305847 - 2306794 | 34141.0 |
| ketose-bisphosphate aldolase | E0F20_11280 | Not Available | Negative | 2306799 - 2307623 | 30326.0 |
| hypothetical protein | E0F20_11285 | Not Available | Negative | 2307722 - 2307943 | 7458.07 |
| multidrug efflux rnd transporter permease subunit | E0F20_11290 | Not Available | Negative | 2308214 - 2311327 | 112303.0 |
| efflux rnd transporter periplasmic adaptor subunit | E0F20_11295 | Not Available | Negative | 2311339 - 2312499 | 41091.7 |
| acref/envcd operon transcriptional regulator | E0F20_11300 | Not Available | Positive | 2312919 - 2313581 | 25005.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

