Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | E0F20_11050 | Not Available | Negative | 2260127 - 2261188 | 38407.8 |
| nadp-dependent oxidoreductase | E0F20_11055 | Not Available | Negative | 2261452 - 2262486 | 37437.1 |
| xre family transcriptional regulator | E0F20_11060 | Not Available | Negative | 2262545 - 2263120 | 21467.8 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | E0F20_11065 | Not Available | Positive | 2263158 - 2263676 | 19527.1 |
| dmt family transporter | E0F20_11070 | Not Available | Positive | 2263673 - 2264122 | 15782.0 |
| duf2526 family protein | E0F20_11075 | Not Available | Negative | 2264183 - 2264416 | 8851.42 |
| abc transporter substrate-binding protein | E0F20_11080 | Not Available | Negative | 2264434 - 2266032 | 59374.2 |
| ssrab-activated protein | E0F20_11085 | Not Available | Positive | 2266315 - 2267622 | 47025.7 |
| virulence factor srfb | E0F20_11090 | Not Available | Positive | 2267627 - 2270608 | 110948.0 |
| virulence effector srfc | E0F20_11095 | Not Available | Positive | 2270605 - 2272767 | 81337.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

