Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | E0F20_10900 | Not Available | Negative | 2226164 - 2228440 | 84185.7 |
| atp-dependent clp protease adapter clps | E0F20_10905 | Not Available | Negative | 2228471 - 2228791 | 12164.7 |
| cold shock-like protein cspd | E0F20_10910 | Not Available | Positive | 2229115 - 2229339 | 7956.37 |
| macb family efflux pump subunit | E0F20_10915 | Not Available | Negative | 2229414 - 2231360 | 70165.2 |
| macrolide transporter subunit maca | E0F20_10920 | Not Available | Negative | 2231357 - 2232472 | 40732.4 |
| duf535 domain-containing protein | E0F20_10925 | Not Available | Positive | 2232632 - 2233579 | 36578.9 |
| atp-dependent endonuclease | E0F20_10930 | Not Available | Negative | 2233576 - 2235234 | 63461.9 |
| aquaporin z | E0F20_10935 | Not Available | Positive | 2235607 - 2236302 | 23845.3 |
| lysine exporter lyso family protein | E0F20_10940 | Not Available | Positive | 2236447 - 2237346 | 32345.3 |
| phzf family isomerase | E0F20_10945 | Not Available | Positive | 2237633 - 2238526 | 31957.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

