Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | E0F20_10750 | Not Available | Positive | 2186213 - 2187835 | 60180.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E0F20_10755 | Not Available | Negative | 2187820 - 2188557 | 27392.7 |
| atp-dependent rna helicase srmb | E0F20_10760 | Not Available | Positive | 2188688 - 2190016 | 49561.5 |
| lysr family transcriptional regulator | E0F20_10765 | Not Available | Negative | 2190034 - 2190930 | 33955.3 |
| cysteine/o-acetylserine transporter | E0F20_10770 | Not Available | Positive | 2191033 - 2191620 | 21362.6 |
| autonomous glycyl radical cofactor grca | E0F20_10775 | Not Available | Negative | 2191700 - 2192083 | 14253.9 |
| uracil-dna glycosylase | E0F20_10780 | Not Available | Positive | 2192401 - 2193090 | 25581.6 |
| trna/rrna methyltransferase | E0F20_10785 | Not Available | Negative | 2193124 - 2194203 | 39318.4 |
| thioredoxin trxc | E0F20_10790 | Not Available | Positive | 2194411 - 2194830 | 15532.6 |
| dtw domain-containing protein | E0F20_10795 | Not Available | Positive | 2194900 - 2195598 | 25895.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

