Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | E0F20_10700 | Not Available | Negative | 2177339 - 2178067 | 27216.8 |
| gtpase era | E0F20_10705 | Not Available | Negative | 2178202 - 2179107 | 33798.9 |
| ribonuclease iii | E0F20_10710 | Not Available | Negative | 2179104 - 2179784 | 25507.5 |
| signal peptidase i | E0F20_10715 | Not Available | Negative | 2180054 - 2181028 | 35975.4 |
| elongation factor 4 | E0F20_10720 | Not Available | Negative | 2181044 - 2182843 | 66622.2 |
| soxr-reducing system protein rsec | E0F20_10725 | Not Available | Negative | 2183114 - 2183578 | 16147.8 |
| sigma-e factor regulatory protein rseb | E0F20_10730 | Not Available | Negative | 2183575 - 2184531 | 35778.7 |
| anti-sigma-e factor rsea | E0F20_10735 | Not Available | Negative | 2184531 - 2185181 | 24214.8 |
| rna polymerase sigma factor rpoe | E0F20_10740 | Not Available | Negative | 2185213 - 2185788 | 21727.0 |
| rpoe leader peptide rsed | E0F20_10745 | Not Available | Negative | 2185785 - 2185949 | 6372.01 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

