Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ureg | E0F20_10450 | Not Available | Positive | 2118982 - 2119599 | 22210.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | E0F20_10455 | Not Available | Negative | 2119637 - 2120650 | 36133.7 |
| 30s ribosomal protein s21 | E0F20_10460 | Not Available | Positive | 2120887 - 2121102 | 8500.42 |
| dna primase | E0F20_10465 | Not Available | Positive | 2121340 - 2123085 | 65302.3 |
| rna polymerase sigma factor rpod | E0F20_10470 | Not Available | Positive | 2123445 - 2125292 | 70579.5 |
| hypothetical protein | E0F20_10475 | Not Available | Negative | 2125305 - 2125469 | 6328.02 |
| ynce family protein | E0F20_10480 | Not Available | Positive | 2125454 - 2126503 | 38242.6 |
| tonb-dependent receptor | E0F20_10485 | Not Available | Positive | 2126514 - 2128511 | 74195.3 |
| g/u mismatch-specific dna glycosylase | E0F20_10490 | Not Available | Negative | 2128542 - 2129048 | 18607.6 |
| Trna-met | Not Available | Not Available | Positive | 2129174 - 2129249 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

