Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | E0F20_10400 | Not Available | Negative | 2110373 - 2111314 | 35077.1 |
| l(+)-tartrate dehydratase subunit alpha | E0F20_10405 | Not Available | Positive | 2111527 - 2112435 | 32595.2 |
| l(+)-tartrate dehydratase subunit beta | E0F20_10410 | Not Available | Positive | 2112432 - 2113037 | 22595.7 |
| anion permease | E0F20_10415 | Not Available | Positive | 2113086 - 2114549 | 52767.6 |
| urease accessory protein ured | E0F20_10420 | Not Available | Positive | 2114754 - 2115494 | 27728.7 |
| urease subunit gamma | E0F20_10425 | Not Available | Positive | 2115505 - 2115807 | 11098.6 |
| urease subunit beta | E0F20_10430 | Not Available | Positive | 2115817 - 2116137 | 11716.0 |
| urease subunit alpha | E0F20_10435 | Not Available | Positive | 2116130 - 2117833 | 60467.3 |
| urease accessory protein uree | E0F20_10440 | Not Available | Positive | 2117843 - 2118301 | 16849.2 |
| urease accessory protein uref | E0F20_10445 | Not Available | Positive | 2118301 - 2118972 | 25318.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

