Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | E0F20_10190 | Not Available | Positive | 2067611 - 2068222 | 21791.4 |
| formate hydrogenlyase subunit 3 | E0F20_10195 | Not Available | Positive | 2068219 - 2070045 | 63914.8 |
| hydrogenase 3 membrane subunit | E0F20_10200 | Not Available | Positive | 2070048 - 2070971 | 33007.4 |
| hydrogenase large subunit | E0F20_10205 | Not Available | Positive | 2070989 - 2072698 | 64997.3 |
| formate hydrogenlyase subunit hycf | E0F20_10210 | Not Available | Positive | 2072708 - 2073250 | 20364.4 |
| formate hydrogenlyase subunit hycg | E0F20_10215 | Not Available | Positive | 2073250 - 2074017 | 28040.8 |
| formate hydrogenlyase maturation protein hych | E0F20_10220 | Not Available | Positive | 2074014 - 2074424 | 15578.6 |
| hydrogenase maturation peptidase hyci | E0F20_10225 | Not Available | Positive | 2074417 - 2074887 | 17054.4 |
| type i toxin-antitoxin system syme family toxin | E0F20_10230 | Not Available | Negative | 2074944 - 2075183 | 8940.87 |
| 6-phospho-beta-glucosidase | E0F20_10235 | Not Available | Negative | 2075351 - 2076775 | 53708.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

