Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | E0F20_10140 | Not Available | Negative | 2058822 - 2059739 | 33390.7 |
| nitrous oxide-stimulated promoter family protein | E0F20_10145 | Not Available | Positive | 2059927 - 2060271 | 13616.7 |
| transporter | E0F20_10150 | Not Available | Negative | 2060392 - 2060820 | 14503.5 |
| formate hydrogenlyase transcriptional activator flha | E0F20_10155 | Not Available | Negative | 2060865 - 2062943 | 78229.3 |
| hydrogenase expression/formation protein hype | E0F20_10160 | Not Available | Negative | 2063071 - 2064081 | 35139.6 |
| hydrogenase formation protein hypd | E0F20_10165 | Not Available | Negative | 2064078 - 2065199 | 41444.8 |
| hydrogenase 3 maturation protein hypc | E0F20_10170 | Not Available | Negative | 2065200 - 2065472 | 9783.68 |
| hydrogenase nickel incorporation protein hypb | E0F20_10175 | Not Available | Negative | 2065463 - 2066335 | 31376.4 |
| hydrogenase maturation nickel metallochaperone hypa | E0F20_10180 | Not Available | Negative | 2066439 - 2066810 | 13843.6 |
| formate hydrogenlyase regulator hyca | E0F20_10185 | Not Available | Positive | 2067009 - 2067467 | 17641.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

