Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 1,2-glucosyltransferase | E0F20_09940 | Not Available | Negative | 2018121 - 2019140 | 39550.3 |
| lipopolysaccharide core heptose(i) kinase rfap | E0F20_09945 | Not Available | Negative | 2019171 - 2019968 | 31087.3 |
| glycosyltransferase family 1 protein | E0F20_09950 | Not Available | Negative | 2019961 - 2021085 | 42433.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | E0F20_09955 | Not Available | Positive | 2021510 - 2022787 | 47297.8 |
| pantetheine-phosphate adenylyltransferase | E0F20_09960 | Not Available | Positive | 2022796 - 2023275 | 17945.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | E0F20_09965 | Not Available | Negative | 2023314 - 2024123 | 30220.6 |
| 50s ribosomal protein l33 | E0F20_09970 | Not Available | Negative | 2024222 - 2024389 | 6371.94 |
| 50s ribosomal protein l28 | E0F20_09975 | Not Available | Negative | 2024410 - 2024646 | 9037.05 |
| jab domain-containing protein | E0F20_09980 | Not Available | Negative | 2024865 - 2025530 | 24999.5 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | E0F20_09985 | Not Available | Positive | 2025702 - 2026922 | 43322.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

