Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | E0F20_09840 | Not Available | Positive | 2000155 - 2000562 | 14907.6 |
| ribonuclease t | E0F20_09845 | Not Available | Positive | 2000658 - 2001305 | 23576.2 |
| grx4 family monothiol glutaredoxin | E0F20_09850 | Not Available | Negative | 2001359 - 2001706 | 12923.5 |
| peptidoglycan endopeptidase | E0F20_09855 | Not Available | Positive | 2002041 - 2002871 | 30533.8 |
| superoxide dismutase | E0F20_09860 | Not Available | Positive | 2002999 - 2003580 | 21261.8 |
| mfs transporter | E0F20_09865 | Not Available | Negative | 2003619 - 2004788 | 40183.5 |
| ynhf family membrane protein | E0F20_09870 | Not Available | Negative | 2004964 - 2005053 | 2955.79 |
| hth-type transcriptional repressor purr | E0F20_09875 | Not Available | Positive | 2005351 - 2006376 | 38106.8 |
| lysr family transcriptional regulator | E0F20_09880 | Not Available | Negative | 2006373 - 2007305 | 35127.7 |
| bcr/cfla family multidrug efflux mfs transporter | E0F20_09885 | Not Available | Positive | 2007419 - 2008624 | 43137.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

