Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | E0F20_09105 | Not Available | Negative | 1866912 - 1868558 | 60407.3 |
| ncs2 family permease | E0F20_09110 | Not Available | Negative | 1868716 - 1870065 | 45727.5 |
| hypothetical protein | E0F20_09115 | Not Available | Positive | 1870232 - 1870435 | 7860.61 |
| redox-sensitive transcriptional activator soxr | E0F20_09120 | Not Available | Negative | 1870665 - 1871123 | 16853.4 |
| superoxide response transcriptional regulator soxs | E0F20_09125 | Not Available | Positive | 1871210 - 1871533 | 12961.6 |
| eal domain-containing protein | E0F20_09130 | Not Available | Negative | 1871536 - 1873122 | 60447.1 |
| hypothetical protein | E0F20_09135 | Not Available | Positive | 1873675 - 1873956 | 10256.9 |
| single-stranded dna-binding protein ssb1 | E0F20_09140 | Not Available | Negative | 1874023 - 1874547 | 18622.8 |
| hypothetical protein | E0F20_09145 | Not Available | Negative | 1874507 - 1874848 | 13408.4 |
| excinuclease abc subunit uvra | E0F20_09150 | Not Available | Positive | 1874799 - 1877621 | 103703.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

