Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase fe-s protein | E0F20_09055 | Not Available | Negative | 1857416 - 1858087 | 24431.4 |
| cytochrome c nitrite reductase pentaheme subunit | E0F20_09060 | Not Available | Negative | 1858084 - 1858650 | 20889.8 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E0F20_09065 | Not Available | Negative | 1858695 - 1860131 | 53698.8 |
| acetate--coa ligase | E0F20_09070 | Not Available | Positive | 1860565 - 1862523 | 72053.3 |
| duf485 domain-containing protein | E0F20_09075 | Not Available | Positive | 1862761 - 1863075 | 11689.5 |
| cation/acetate symporter actp | E0F20_09080 | Not Available | Positive | 1863072 - 1864721 | 59205.6 |
| lrgb family protein | E0F20_09085 | Not Available | Negative | 1864767 - 1865429 | 24019.4 |
| cida/lrga family protein | E0F20_09090 | Not Available | Negative | 1865422 - 1865832 | 15346.7 |
| lysr family transcriptional regulator | E0F20_09095 | Not Available | Positive | 1865934 - 1866824 | 33442.9 |
| hypothetical protein | E0F20_09100 | Not Available | Positive | 1866793 - 1867008 | 8049.72 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

