Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potd | E0F20_08695 | Not Available | Negative | 1802950 - 1803996 | 39025.2 |
| spermidine/putrescine abc transporter permease potc | E0F20_08700 | Not Available | Negative | 1804024 - 1804803 | 28526.2 |
| spermidine/putrescine abc transporter permease potb | E0F20_08705 | Not Available | Negative | 1804800 - 1805657 | 32248.3 |
| spermidine/putrescine abc transporter atp-binding protein pota | E0F20_08710 | Not Available | Negative | 1805641 - 1806777 | 42953.6 |
| peptidase t | E0F20_08715 | Not Available | Positive | 1807028 - 1808254 | 44706.8 |
| cupin domain-containing protein | E0F20_08720 | Not Available | Negative | 1808357 - 1809478 | 42702.3 |
| two-component system sensor histidine kinase phoq | E0F20_08725 | Not Available | Negative | 1809571 - 1811034 | 55319.6 |
| two-component system response regulator phop | E0F20_08730 | Not Available | Negative | 1811034 - 1811708 | 25642.9 |
| phage tail protein | E0F20_08740 | Not Available | Positive | 1812831 - 1813000 | 5917.1 |
| cytochrome c nitrite reductase subunit nrfd | E0F20_09050 | Not Available | Negative | 1856463 - 1857419 | 35245.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

