Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family copper-responsive transcriptional repressor comr | E0F20_08645 | Not Available | Negative | 1790646 - 1791281 | 23651.3 |
| duf1471 domain-containing protein | E0F20_08650 | Not Available | Positive | 1791525 - 1791782 | 8774.46 |
| lysm peptidoglycan-binding domain-containing protein | E0F20_08655 | Not Available | Negative | 1791869 - 1792834 | 34652.9 |
| transcription-repair coupling factor | E0F20_08660 | Not Available | Negative | 1792984 - 1796430 | 129898.0 |
| hypothetical protein | E0F20_08665 | Not Available | Negative | 1796549 - 1797613 | 40233.4 |
| lipoprotein-releasing abc transporter permease subunit lolc | E0F20_08670 | Not Available | Positive | 1797875 - 1799074 | 43265.7 |
| lipoprotein-releasing abc transporter atp-binding protein lold | E0F20_08675 | Not Available | Positive | 1799067 - 1799768 | 25437.8 |
| lipoprotein-releasing abc transporter permease subunit lole | E0F20_08680 | Not Available | Positive | 1799768 - 1801012 | 45117.6 |
| n-acetylglucosamine kinase | E0F20_08685 | Not Available | Positive | 1801102 - 1802013 | 33098.6 |
| nad-dependent protein deacylase | E0F20_08690 | Not Available | Positive | 1802029 - 1802850 | 31100.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

