Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase subunit paaj | E0F20_08545 | Not Available | Positive | 1770335 - 1770835 | 18438.1 |
| phenylacetate-coa oxygenase/reductase subunit paak | E0F20_08550 | Not Available | Positive | 1770843 - 1771913 | 38672.1 |
| 2,3-dehydroadipyl-coa hydratase | E0F20_08555 | Not Available | Positive | 1771910 - 1772677 | 27409.1 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | E0F20_08560 | Not Available | Positive | 1772680 - 1773468 | 28487.4 |
| 3-hydroxyacyl-coa dehydrogenase | E0F20_08565 | Not Available | Positive | 1773472 - 1774890 | 50925.2 |
| hydroxyphenylacetyl-coa thioesterase paai | E0F20_08570 | Not Available | Positive | 1774883 - 1775305 | 15023.0 |
| 3-oxoadipyl-coa thiolase | E0F20_08575 | Not Available | Positive | 1775305 - 1776510 | 42375.1 |
| phenylacetate--coa ligase | E0F20_08580 | Not Available | Positive | 1776539 - 1777855 | 48773.4 |
| phenylacetic acid degradation operon negative regulatory protein paax | E0F20_08585 | Not Available | Positive | 1778005 - 1778940 | 34848.4 |
| phenylacetic acid degradation protein paay | E0F20_08590 | Not Available | Positive | 1778952 - 1779548 | 21188.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

