Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | E0F20_08495 | Not Available | Positive | 1757806 - 1759503 | 63262.9 |
| abc-f family atp-binding cassette domain-containing protein | E0F20_08500 | Not Available | Positive | 1759813 - 1761528 | 63816.4 |
| inorganic diphosphatase | E0F20_08505 | Not Available | Negative | 1761608 - 1762210 | 22248.8 |
| formate dehydrogenase-n subunit gamma | E0F20_08510 | Not Available | Negative | 1762340 - 1762996 | 25614.3 |
| formate dehydrogenase subunit beta | E0F20_08515 | Not Available | Negative | 1762989 - 1763873 | 32347.5 |
| formate dehydrogenase-n subunit alpha | E0F20_08520 | Not Available | Negative | 1763887 - 1766934 | 112779.0 |
| drug/metabolite dmt transporter permease | E0F20_08525 | Not Available | Positive | 1767222 - 1768103 | 31457.4 |
| 1,2-phenylacetyl-coa epoxidase subunit a | E0F20_08530 | Not Available | Positive | 1768331 - 1769260 | 35115.7 |
| 1,2-phenylacetyl-coa epoxidase subunit b | E0F20_08535 | Not Available | Positive | 1769272 - 1769559 | 10950.8 |
| phenylacetate-coa oxygenase subunit paai | E0F20_08540 | Not Available | Positive | 1769567 - 1770322 | 27969.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

