Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | E0F20_08395 | Not Available | Negative | 1738512 - 1739783 | 47364.4 |
| xre family transcriptional regulator | E0F20_08400 | Not Available | Negative | 1739776 - 1740090 | 11450.9 |
| methyl-accepting chemotaxis protein | E0F20_08405 | Not Available | Negative | 1740270 - 1742213 | 69825.0 |
| acid-activated periplasmic chaperone hdeb | E0F20_08410 | Not Available | Negative | 1742369 - 1742698 | 11967.2 |
| murr/rpir family transcriptional regulator | E0F20_08415 | Not Available | Positive | 1743100 - 1743966 | 32376.7 |
| d-alanyl-d-alanine dipeptidase | E0F20_08420 | Not Available | Positive | 1743981 - 1744568 | 21521.6 |
| abc transporter substrate-binding protein | E0F20_08425 | Not Available | Positive | 1744584 - 1746146 | 57288.0 |
| abc transporter permease | E0F20_08430 | Not Available | Positive | 1746191 - 1747213 | 37464.5 |
| d,d-dipeptide abc transporter permease | E0F20_08435 | Not Available | Positive | 1747210 - 1748106 | 32022.9 |
| abc transporter atp-binding protein | E0F20_08440 | Not Available | Positive | 1748103 - 1749089 | 36049.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

