Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_08345 | Not Available | Positive | 1722904 - 1723290 | 14742.7 |
| arac family transcriptional regulator | E0F20_08350 | Not Available | Positive | 1723300 - 1724133 | 31050.9 |
| hypothetical protein | E0F20_08355 | Not Available | Positive | 1724291 - 1725757 | 53716.1 |
| dha2 family efflux mfs transporter permease subunit | E0F20_08360 | Not Available | Positive | 1725886 - 1727283 | 49918.5 |
| heme peroxidase | E0F20_08365 | Not Available | Positive | 1727732 - 1733062 | 187583.0 |
| type i secretion system permease/atpase | E0F20_08370 | Not Available | Positive | 1733073 - 1734812 | 62976.5 |
| hlyd family type i secretion periplasmic adaptor subunit | E0F20_08375 | Not Available | Positive | 1734815 - 1736140 | 49092.4 |
| duf2132 domain-containing protein | E0F20_08380 | Not Available | Positive | 1736275 - 1736562 | 10906.8 |
| glycoside hydrolase family 10 protein | E0F20_08385 | Not Available | Positive | 1736575 - 1737942 | 51461.1 |
| hypothetical protein | E0F20_08390 | Not Available | Negative | 1737939 - 1738457 | 19208.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

