Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dksa/trar family c4-type zinc finger protein | E0F20_08140 | Not Available | Positive | 1679475 - 1679741 | 9627.01 |
| duf1471 domain-containing protein | E0F20_08145 | Not Available | Positive | 1680045 - 1680305 | 8572.32 |
| malate/lactate/ureidoglycolate dehydrogenase | E0F20_08150 | Not Available | Negative | 1680403 - 1681488 | 38778.4 |
| dna-binding protein ybib | E0F20_08155 | Not Available | Negative | 1681651 - 1682619 | 35111.8 |
| atp-dependent dna helicase ding | E0F20_08160 | Not Available | Negative | 1682649 - 1684799 | 81290.6 |
| atp-dependent rna helicase rhle | E0F20_08165 | Not Available | Negative | 1684896 - 1686242 | 49266.4 |
| transcriptional regulator | E0F20_08170 | Not Available | Positive | 1686468 - 1687145 | 25061.0 |
| secretion protein hlyd | E0F20_08175 | Not Available | Positive | 1687142 - 1688137 | 36211.7 |
| abc transporter atp-binding protein | E0F20_08180 | Not Available | Positive | 1688130 - 1689866 | 62938.2 |
| abc transporter permease | E0F20_08185 | Not Available | Positive | 1689859 - 1690992 | 42201.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

