Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | E0F20_08090 | Not Available | Negative | 1668128 - 1668442 | 12391.6 |
| lactaldehyde reductase | E0F20_08095 | Not Available | Negative | 1668439 - 1669587 | 40306.5 |
| rhamnulose-1-phosphate aldolase | E0F20_08100 | Not Available | Negative | 1669599 - 1670423 | 30001.2 |
| l-rhamnose isomerase | E0F20_08105 | Not Available | Negative | 1670567 - 1671826 | 47184.0 |
| rhamnulokinase | E0F20_08110 | Not Available | Negative | 1671823 - 1673292 | 54298.7 |
| hth-type transcriptional activator rhas | E0F20_08115 | Not Available | Positive | 1673596 - 1674444 | 32350.7 |
| hth-type transcriptional activator rhar | E0F20_08120 | Not Available | Positive | 1674576 - 1675415 | 32433.6 |
| hypothetical protein | E0F20_08125 | Not Available | Positive | 1675598 - 1676257 | 25050.3 |
| catecholate siderophore receptor fiu | E0F20_08130 | Not Available | Positive | 1676393 - 1678678 | 81938.4 |
| fe2+-dependent dioxygenase | E0F20_08135 | Not Available | Positive | 1678722 - 1679399 | 25271.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

