Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Regulatory protein cii | E0F20_13115 | Not Available | Negative | 2665844 - 2666347 | 17804.3 |
| Regulator | E0F20_13120 | Not Available | Negative | 2666378 - 2666599 | 7993.91 |
| Repressor protein ci | E0F20_13125 | Not Available | Positive | 2666741 - 2667322 | 21555.1 |
| Orf015 | E0F20_13130 | Not Available | Positive | 2667339 - 2667905 | 21008.4 |
| Phage integrase family protein | E0F20_13135 | Not Available | Positive | 2667909 - 2668928 | 39026.4 |
| Attr | Not Available | Not Available | Positive | 2670781 - 2670792 | Not Available |
| Attl | Not Available | Not Available | Positive | 3259652 - 3259664 | Not Available |
| Integrase | E0F20_16150 | Not Available | Positive | 3260944 - 3262221 | 48979.5 |
| atp-binding protein | E0F20_16155 | Not Available | Negative | 3262235 - 3263956 | 62983.6 |
| sir2 family protein | E0F20_16160 | Not Available | Negative | 3263958 - 3265262 | 49512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

