Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | E0F20_07885 | Not Available | Negative | 1624088 - 1625866 | 66012.3 |
| amp nucleosidase | E0F20_07890 | Not Available | Negative | 1625883 - 1627337 | 54083.1 |
| shikimate transporter | E0F20_07895 | Not Available | Negative | 1627456 - 1628772 | 47541.5 |
| n-acetyltransferase | E0F20_07900 | Not Available | Negative | 1629017 - 1629220 | 7663.31 |
| hypothetical protein | E0F20_07905 | Not Available | Positive | 1629318 - 1629539 | 8485.09 |
| dna polymerase i | E0F20_07910 | Not Available | Positive | 1629921 - 1632707 | 103410.0 |
| yiha family ribosome biogenesis gtp-binding protein | E0F20_07915 | Not Available | Negative | 1633040 - 1633672 | 23525.4 |
| der gtpase-activating protein yihi | E0F20_07920 | Not Available | Positive | 1634233 - 1634745 | 18987.3 |
| oxygen-independent coproporphyrinogen iii oxidase | E0F20_07925 | Not Available | Positive | 1634934 - 1636307 | 52637.8 |
| hypothetical protein | E0F20_07930 | Not Available | Negative | 1636397 - 1636507 | 3632.48 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

