Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | E0F20_07575 | Not Available | Positive | 1564206 - 1564871 | 25293.4 |
| duf1795 domain-containing protein | E0F20_07580 | Not Available | Positive | 1564944 - 1565501 | 19618.3 |
| mfs transporter | E0F20_07585 | Not Available | Negative | 1565505 - 1566722 | 42108.1 |
| ai-2e family transporter | E0F20_07590 | Not Available | Positive | 1566856 - 1567905 | 38400.5 |
| 4'-phosphopantetheinyl transferase acpt | E0F20_07595 | Not Available | Positive | 1567968 - 1568546 | 21015.1 |
| nickel-responsive transcriptional regulator nikr | E0F20_07600 | Not Available | Positive | 1568596 - 1568997 | 15109.7 |
| abc transporter permease | E0F20_07605 | Not Available | Negative | 1569092 - 1570216 | 41060.4 |
| abc transporter atp-binding protein/permease | E0F20_07610 | Not Available | Negative | 1570216 - 1572963 | 101038.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | E0F20_07615 | Not Available | Negative | 1572960 - 1574027 | 38986.9 |
| magnesium transporter | E0F20_07620 | Not Available | Positive | 1574668 - 1575681 | 36984.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

