Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | E0F20_07265 | Not Available | Negative | 1498888 - 1500063 | 45788.1 |
| ynce family protein | E0F20_07270 | Not Available | Positive | 1500363 - 1501448 | 39101.9 |
| phenylalanine transporter | E0F20_07275 | Not Available | Positive | 1501595 - 1502989 | 51056.7 |
| mechanosensitive ion channel family protein | E0F20_07280 | Not Available | Negative | 1503044 - 1504288 | 46617.4 |
| oxygen-insensitive nad(p)h nitroreductase | E0F20_07285 | Not Available | Negative | 1504353 - 1505006 | 23876.4 |
| mmcq/yjbr family dna-binding protein | E0F20_07290 | Not Available | Negative | 1505126 - 1505494 | 14086.1 |
| tetr/acrr family transcriptional regulator | E0F20_07295 | Not Available | Negative | 1505494 - 1506075 | 22004.1 |
| mbl fold metallo-hydrolase | E0F20_07300 | Not Available | Positive | 1506265 - 1507377 | 41702.1 |
| rama family antibiotic efflux transcriptional regulator | E0F20_07305 | Not Available | Positive | 1507395 - 1507736 | 13480.0 |
| duf1158 domain-containing protein | E0F20_07310 | Not Available | Negative | 1507758 - 1508006 | 9495.26 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

