Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit alpha | E0F20_07115 | Not Available | Negative | 1453135 - 1454964 | 66349.6 |
| exodeoxyribonuclease v subunit beta | E0F20_07120 | Not Available | Negative | 1454961 - 1458506 | 133311.0 |
| pitrilysin | E0F20_07125 | Not Available | Negative | 1458499 - 1461387 | 107530.0 |
| exodeoxyribonuclease v subunit gamma | E0F20_07130 | Not Available | Negative | 1461567 - 1464935 | 129189.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | E0F20_07135 | Not Available | Negative | 1464948 - 1465271 | 12425.3 |
| duf2509 family protein | E0F20_07140 | Not Available | Negative | 1465256 - 1465663 | 15161.5 |
| prepilin peptidase-dependent protein | E0F20_07145 | Not Available | Negative | 1465660 - 1466223 | 20657.8 |
| prepilin peptidase-dependent protein | E0F20_07150 | Not Available | Negative | 1466214 - 1466684 | 17745.4 |
| thymidylate synthase | E0F20_07155 | Not Available | Negative | 1466868 - 1467662 | 30426.3 |
| prolipoprotein diacylglyceryl transferase | E0F20_07160 | Not Available | Negative | 1467669 - 1468544 | 33164.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

