Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | E0F20_07065 | Not Available | Negative | 1445403 - 1445630 | 8117.61 |
| cysteine desulfurase csda | E0F20_07070 | Not Available | Positive | 1445823 - 1447028 | 42927.3 |
| cysteine desulfurase sulfur acceptor subunit csde | E0F20_07075 | Not Available | Positive | 1447028 - 1447474 | 16079.4 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E0F20_07080 | Not Available | Negative | 1447552 - 1448358 | 28542.6 |
| murein transglycosylase a | E0F20_07085 | Not Available | Negative | 1448493 - 1449590 | 40181.5 |
| Trna-met | Not Available | Not Available | Positive | 1449796 - 1449872 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1449921 - 1449997 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1450041 - 1450117 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | E0F20_07105 | Not Available | Negative | 1450192 - 1451445 | 45540.0 |
| amino-acid n-acetyltransferase | E0F20_07110 | Not Available | Positive | 1451680 - 1453011 | 49415.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

