Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_07015 | Not Available | Negative | 1437594 - 1437647 | 1893.36 |
| pyr operon leader peptide | E0F20_07020 | Not Available | Negative | 1437628 - 1437729 | 3851.85 |
| hypothetical protein | E0F20_07025 | Not Available | Positive | 1437709 - 1437831 | 4828.74 |
| l-fucose isomerase | E0F20_07030 | Not Available | Positive | 1438053 - 1439828 | 65012.4 |
| l-fuculokinase | E0F20_07035 | Not Available | Positive | 1439951 - 1441369 | 52100.2 |
| l-fucose mutarotase | E0F20_07040 | Not Available | Positive | 1441371 - 1441793 | 15365.8 |
| l-fucose operon activator | E0F20_07045 | Not Available | Positive | 1441851 - 1442579 | 27191.4 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | E0F20_07050 | Not Available | Negative | 1442615 - 1443715 | 41903.6 |
| duf423 domain-containing protein | E0F20_07055 | Not Available | Negative | 1443708 - 1444103 | 14440.1 |
| transcriptional regulator gcva | E0F20_07060 | Not Available | Negative | 1444122 - 1445039 | 34366.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

