Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_06910 | Not Available | Positive | 1414619 - 1414981 | 12457.1 |
| duf4312 family protein | E0F20_06915 | Not Available | Positive | 1414984 - 1415283 | 11329.8 |
| duf4311 domain-containing protein | E0F20_06920 | Not Available | Positive | 1415306 - 1416082 | 27283.9 |
| duf4310 family protein | E0F20_06925 | Not Available | Positive | 1416094 - 1416738 | 21932.3 |
| amidohydrolase/deacetylase family metallohydrolase | E0F20_06930 | Not Available | Positive | 1416797 - 1417930 | 40446.4 |
| dgae family pyridoxal phosphate-dependent ammonia lyase | E0F20_06935 | Not Available | Positive | 1417914 - 1419032 | 39958.2 |
| oxo-acid lyase | E0F20_06940 | Not Available | Positive | 1419029 - 1419769 | 26204.5 |
| prd domain-containing protein | E0F20_06945 | Not Available | Positive | 1419791 - 1421704 | 72908.1 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | E0F20_06950 | Not Available | Negative | 1421738 - 1422202 | 17460.9 |
| anaerobic ribonucleoside-triphosphate reductase | E0F20_06955 | Not Available | Negative | 1422387 - 1424525 | 80110.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

