Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease yjff | E0F20_06860 | Not Available | Positive | 1406018 - 1407019 | 35139.1 |
| hamp domain-containing protein | E0F20_06865 | Not Available | Positive | 1407123 - 1408235 | 39792.6 |
| class 1 fructose-bisphosphatase | E0F20_06870 | Not Available | Negative | 1408350 - 1409348 | 36627.8 |
| hypothetical protein | E0F20_06875 | Not Available | Positive | 1409411 - 1409605 | 7665.43 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | E0F20_06880 | Not Available | Positive | 1409524 - 1410903 | 50100.2 |
| gnat family n-acetyltransferase | E0F20_06885 | Not Available | Positive | 1410973 - 1411497 | 19998.8 |
| ribosome-associated protein | E0F20_06890 | Not Available | Negative | 1411535 - 1412086 | 21371.5 |
| metalloprotease pmba | E0F20_06895 | Not Available | Positive | 1412182 - 1413534 | 48411.4 |
| cytochrome b562 | E0F20_06900 | Not Available | Positive | 1413581 - 1413967 | 14046.9 |
| glycine dehydrogenase | E0F20_06905 | Not Available | Positive | 1414300 - 1414608 | 11381.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

