Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor abc transporter transmembrane protein | E0F20_06435 | Not Available | Positive | 1323098 - 1323775 | 25902.7 |
| energy-coupling factor abc transporter atp-binding protein | E0F20_06440 | Not Available | Positive | 1323784 - 1324599 | 30033.2 |
| cobyric acid synthase | E0F20_06445 | Not Available | Positive | 1324596 - 1326116 | 55157.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | E0F20_06450 | Not Available | Positive | 1326113 - 1326658 | 19970.0 |
| adenosylcobinamide-gdp ribazoletransferase | E0F20_06455 | Not Available | Positive | 1326655 - 1327398 | 26322.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | E0F20_06460 | Not Available | Positive | 1327423 - 1328487 | 36313.6 |
| l,d-transpeptidase | E0F20_06465 | Not Available | Positive | 1328615 - 1329544 | 33935.8 |
| abc transporter atp-binding protein | E0F20_06470 | Not Available | Negative | 1329569 - 1330252 | 25261.6 |
| iron abc transporter permease | E0F20_06475 | Not Available | Negative | 1330263 - 1331951 | 60532.8 |
| extracellular solute-binding protein | E0F20_06480 | Not Available | Negative | 1331935 - 1332972 | 37556.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

