Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | E0F20_06185 | Not Available | Positive | 1278698 - 1279690 | 36646.2 |
| 3-isopropylmalate dehydratase small subunit | E0F20_06190 | Not Available | Negative | 1279736 - 1280341 | 22558.7 |
| 3-isopropylmalate dehydratase large subunit | E0F20_06195 | Not Available | Negative | 1280352 - 1281752 | 49877.6 |
| 3-isopropylmalate dehydrogenase | E0F20_06200 | Not Available | Negative | 1281755 - 1282846 | 39456.2 |
| 2-isopropylmalate synthase | E0F20_06205 | Not Available | Negative | 1282846 - 1284417 | 57440.3 |
| leu operon leader peptide | E0F20_06210 | Not Available | Negative | 1284508 - 1284594 | 3187.92 |
| thiosulfate reductase phsa | E0F20_06215 | Not Available | Positive | 1284880 - 1287153 | 82796.3 |
| thiosulfate reductase electron transport protein phsb | E0F20_06220 | Not Available | Positive | 1287168 - 1287746 | 21664.7 |
| thiosulfate reductase cytochrome b subunit | E0F20_06225 | Not Available | Positive | 1287743 - 1288510 | 28565.8 |
| serine-type d-ala-d-ala carboxypeptidase dacd | E0F20_06230 | Not Available | Positive | 1288650 - 1289822 | 43214.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

