Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose operon transcriptional regulator arac | E0F20_06135 | Not Available | Positive | 1267526 - 1268371 | 32124.2 |
| deda family protein | E0F20_06140 | Not Available | Positive | 1268491 - 1269258 | 28401.0 |
| thiamine abc transporter atp-binding protein thiq | E0F20_06145 | Not Available | Negative | 1269356 - 1270054 | 25174.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | E0F20_06150 | Not Available | Negative | 1270038 - 1271648 | 59602.8 |
| thiamine abc transporter substrate binding subunit | E0F20_06155 | Not Available | Negative | 1271624 - 1272607 | 36444.6 |
| hth-type transcriptional regulator sgrr | E0F20_06160 | Not Available | Negative | 1272795 - 1274450 | 64015.8 |
| glucose uptake inhibitor sgrt | E0F20_06165 | Not Available | Positive | 1274550 - 1274678 | 5133.23 |
| mfs transporter | E0F20_06170 | Not Available | Positive | 1275052 - 1276230 | 42652.8 |
| gluconate 5-dehydrogenase | E0F20_06175 | Not Available | Positive | 1276509 - 1277273 | 27410.0 |
| mfs transporter | E0F20_06180 | Not Available | Positive | 1277332 - 1278615 | 47635.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

