Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E0F20_06085 | Not Available | Negative | 1251166 - 1252158 | 34988.6 |
| peptidylprolyl isomerase sura | E0F20_06090 | Not Available | Negative | 1252158 - 1253444 | 46984.2 |
| lps assembly protein lptd | E0F20_06095 | Not Available | Negative | 1253498 - 1255852 | 89601.7 |
| co-chaperone djla | E0F20_06100 | Not Available | Positive | 1256108 - 1256923 | 30718.4 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E0F20_06105 | Not Available | Negative | 1257019 - 1257678 | 24885.1 |
| rna polymerase-associated protein rapa | E0F20_06110 | Not Available | Negative | 1257690 - 1260596 | 109655.0 |
| dna polymerase ii | E0F20_06115 | Not Available | Negative | 1260728 - 1263079 | 90103.7 |
| l-ribulose-5-phosphate 4-epimerase | E0F20_06120 | Not Available | Negative | 1263171 - 1263866 | 25529.3 |
| l-arabinose isomerase | E0F20_06125 | Not Available | Negative | 1263964 - 1265466 | 56016.1 |
| ribulokinase | E0F20_06130 | Not Available | Negative | 1265477 - 1267186 | 61934.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

