Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | E0F20_05925 | Not Available | Negative | 1220156 - 1220887 | 26950.7 |
| deoxyribonuclease i | E0F20_05930 | Not Available | Negative | 1220962 - 1221669 | 26686.3 |
| sprt family zinc-dependent metalloprotease | E0F20_05935 | Not Available | Negative | 1221764 - 1222261 | 19390.7 |
| sugar porter family mfs transporter | E0F20_05940 | Not Available | Negative | 1222339 - 1223733 | 50933.6 |
| methionine adenosyltransferase | E0F20_05945 | Not Available | Negative | 1224133 - 1225287 | 41902.9 |
| virulence promoting factor | E0F20_05960 | Not Available | Positive | 1225935 - 1226066 | 4979.43 |
| biosynthetic arginine decarboxylase | E0F20_05965 | Not Available | Positive | 1226075 - 1228051 | 73824.3 |
| agmatinase | E0F20_05970 | Not Available | Positive | 1228289 - 1229209 | 33620.0 |
| metalloprotease | E0F20_05975 | Not Available | Negative | 1229406 - 1230164 | 26572.6 |
| transketolase | E0F20_05980 | Not Available | Positive | 1230444 - 1232435 | 71974.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

