Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | E0F20_05585 | Not Available | Positive | 1151676 - 1152587 | 34748.3 |
| glycine--trna ligase subunit beta | E0F20_05590 | Not Available | Positive | 1152597 - 1154666 | 76517.8 |
| hypothetical protein | E0F20_05595 | Not Available | Negative | 1154780 - 1155319 | 19558.4 |
| rna chaperone/antiterminator cspa | E0F20_05600 | Not Available | Negative | 1155507 - 1155719 | 7403.66 |
| hth-type transcriptional regulator | E0F20_05605 | Not Available | Negative | 1155999 - 1156289 | 11167.6 |
| duf3053 domain-containing protein | E0F20_05610 | Not Available | Positive | 1156670 - 1157380 | 25629.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | E0F20_05615 | Not Available | Negative | 1157439 - 1158413 | 35524.7 |
| mfs transporter | E0F20_05620 | Not Available | Negative | 1158436 - 1159716 | 47034.1 |
| sugar kinase | E0F20_05625 | Not Available | Negative | 1159787 - 1160725 | 33344.8 |
| sugar phosphate isomerase/epimerase | E0F20_05630 | Not Available | Negative | 1160729 - 1161478 | 27485.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

