Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | E0F20_05535 | Not Available | Positive | 1140047 - 1140520 | 17082.7 |
| valine--pyruvate transaminase | E0F20_05540 | Not Available | Negative | 1140555 - 1141805 | 46729.8 |
| alpha-amylase | E0F20_05545 | Not Available | Negative | 1141982 - 1144012 | 75466.2 |
| protein bax | E0F20_05550 | Not Available | Positive | 1144329 - 1145153 | 30908.2 |
| xylose operon transcription regulator xylr | E0F20_05555 | Not Available | Negative | 1145198 - 1146376 | 44695.3 |
| xylose isomerase | E0F20_05560 | Not Available | Positive | 1146738 - 1148060 | 49556.5 |
| xylulokinase | E0F20_05565 | Not Available | Positive | 1148132 - 1149586 | 52524.2 |
| hypothetical protein | E0F20_05570 | Not Available | Positive | 1149754 - 1150107 | 12939.5 |
| acyltransferase | E0F20_05575 | Not Available | Negative | 1150104 - 1151099 | 37486.0 |
| hypothetical protein | E0F20_05580 | Not Available | Positive | 1151272 - 1151580 | 11401.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

