Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | E0F20_05485 | Not Available | Positive | 1130501 - 1131316 | 30719.4 |
| l-ribulose-5-phosphate 4-epimerase | E0F20_05490 | Not Available | Negative | 1131321 - 1132016 | 25548.3 |
| l-ribulose-5-phosphate 3-epimerase | E0F20_05495 | Not Available | Negative | 1132010 - 1132870 | 32406.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | E0F20_05500 | Not Available | Negative | 1132863 - 1133525 | 23487.0 |
| carbohydrate kinase | E0F20_05505 | Not Available | Negative | 1133525 - 1135027 | 54958.3 |
| mfs transporter | E0F20_05510 | Not Available | Negative | 1135125 - 1136444 | 47488.4 |
| duf4862 family protein | E0F20_05515 | Not Available | Negative | 1136476 - 1137408 | 34261.7 |
| yhch/yjgk/yial family protein | E0F20_05520 | Not Available | Negative | 1137422 - 1137886 | 17494.1 |
| 3-dehydro-l-gulonate 2-dehydrogenase | E0F20_05525 | Not Available | Negative | 1137898 - 1138896 | 36657.9 |
| iclr family transcriptional regulator yiaj | E0F20_05530 | Not Available | Positive | 1139114 - 1139929 | 29857.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

