Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p--(r)-beta-lysine ligase | E0F20_05330 | Not Available | Positive | 1097529 - 1098506 | 36965.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | E0F20_05335 | Not Available | Positive | 1098721 - 1100223 | 54658.1 |
| hypothetical protein | E0F20_05345 | Not Available | Positive | 1100987 - 1101295 | 11784.2 |
| duf2645 family protein | E0F20_05350 | Not Available | Positive | 1101296 - 1101610 | 12378.3 |
| miniconductance mechanosensitive channel mscm | E0F20_05355 | Not Available | Negative | 1101700 - 1105014 | 123222.0 |
| phosphatidylserine decarboxylase | E0F20_05360 | Not Available | Negative | 1105032 - 1106000 | 36101.5 |
| small ribosomal subunit biogenesis gtpase rsga | E0F20_05365 | Not Available | Negative | 1106093 - 1107169 | 40103.5 |
| oligoribonuclease | E0F20_05370 | Not Available | Positive | 1107251 - 1107796 | 20759.7 |
| Trna-gly | Not Available | Not Available | Positive | 1107982 - 1108057 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1108095 - 1108170 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

