Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein toxin entericidin b | E0F20_05280 | Not Available | Positive | 1089746 - 1089892 | 4781.8 |
| helix-turn-helix transcriptional regulator | E0F20_05285 | Not Available | Negative | 1089923 - 1090522 | 22061.0 |
| quaternary ammonium compound-resistance protein suge | E0F20_05290 | Not Available | Positive | 1090779 - 1091096 | 10898.0 |
| outer membrane lipoprotein blc | E0F20_05295 | Not Available | Negative | 1091093 - 1091626 | 19921.9 |
| class c beta-lactamase cmy-109 | E0F20_05300 | Not Available | Negative | 1091719 - 1092864 | 41948.6 |
| lysr family transcriptional regulator | E0F20_05305 | Not Available | Positive | 1092996 - 1093871 | 32521.2 |
| fumarate reductase subunit frdd | E0F20_05310 | Not Available | Negative | 1093914 - 1094270 | 13046.6 |
| fumarate reductase subunit frdc | E0F20_05315 | Not Available | Negative | 1094281 - 1094676 | 14880.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E0F20_05320 | Not Available | Negative | 1094687 - 1095421 | 27158.5 |
| fumarate reductase (quinol) flavoprotein subunit | E0F20_05325 | Not Available | Negative | 1095414 - 1097204 | 65412.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

