Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofc | E0F20_05075 | Not Available | Negative | 1041486 - 1042688 | 44442.9 |
| type ii secretion system protein gspe | E0F20_05080 | Not Available | Negative | 1042678 - 1044060 | 50549.2 |
| prepilin peptidase-dependent pilin | E0F20_05085 | Not Available | Negative | 1044070 - 1044507 | 15788.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | E0F20_05090 | Not Available | Negative | 1044751 - 1045644 | 32929.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | E0F20_05095 | Not Available | Positive | 1045732 - 1046295 | 20781.4 |
| beta-lactamase regulator ampe | E0F20_05100 | Not Available | Positive | 1046292 - 1047146 | 32112.8 |
| alpha-n-arabinofuranosidase | E0F20_05105 | Not Available | Negative | 1047239 - 1048189 | 36544.7 |
| mfs transporter | E0F20_05110 | Not Available | Negative | 1048189 - 1049595 | 52937.7 |
| aromatic amino acid transporter arop | E0F20_05115 | Not Available | Negative | 1049753 - 1051123 | 49482.7 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | E0F20_05120 | Not Available | Positive | 1051691 - 1052455 | 29320.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

