Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit beta | E0F20_04755 | Not Available | Negative | 977472 - 978359 | 32303.4 |
| formate dehydrogenase-n subunit alpha | E0F20_04760 | Not Available | Negative | 978372 - 981422 | 112786.0 |
| duf417 domain-containing protein | E0F20_04770 | Not Available | Positive | 981946 - 982548 | 22394.2 |
| duf302 domain-containing protein | E0F20_04775 | Not Available | Positive | 982673 - 983041 | 13691.5 |
| metal/formaldehyde-sensitive transcriptional repressor | E0F20_04780 | Not Available | Positive | 983163 - 983438 | 10158.5 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | E0F20_04785 | Not Available | Positive | 983471 - 984589 | 39315.4 |
| hamp domain-containing protein | E0F20_04795 | Not Available | Positive | 984759 - 986447 | 60304.9 |
| pca operon transcription factor pcaq | E0F20_04800 | Not Available | Negative | 986488 - 987411 | 33492.0 |
| manganese-dependent inorganic pyrophosphatase | E0F20_04805 | Not Available | Positive | 987643 - 988545 | 33248.9 |
| voc family protein | E0F20_04810 | Not Available | Positive | 988666 - 990009 | 50692.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

