Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | E0F20_04495 | Not Available | Positive | 928051 - 929772 | 62581.7 |
| leucyl/phenylalanyl-trna--protein transferase | E0F20_04500 | Not Available | Positive | 929817 - 930521 | 26678.0 |
| translation initiation factor if-1 | E0F20_04510 | Not Available | Positive | 930807 - 931025 | 8236.07 |
| lysr family transcriptional regulator | E0F20_04515 | Not Available | Negative | 931105 - 932016 | 33815.2 |
| pirin family protein | E0F20_04520 | Not Available | Positive | 932125 - 932985 | 31041.7 |
| isochorismatase family protein | E0F20_04525 | Not Available | Positive | 933002 - 933679 | 24125.0 |
| Trna-ser | Not Available | Not Available | Positive | 933829 - 933916 | Not Available |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | E0F20_04540 | Not Available | Negative | 934420 - 935547 | 42032.1 |
| duf2593 family protein | E0F20_04545 | Not Available | Negative | 935589 - 936077 | 18521.2 |
| putrescine abc transporter permease poti | E0F20_04550 | Not Available | Negative | 936137 - 936982 | 30634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

